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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863838.1_cds_XP_016515796.1_28105
CDS Infomation

[gene=LOC107832463] [db_xref=GeneID:107832463] [protein=ferrochelatase-2, chloroplastic-like isoform X3] [protein_id=XP_016515796.1] [location=complement(join(20330..20554,34422..34623,34734..34834,36044..36196,36800..36926,37016..37119,41210..41311,41720..41863,41950..42285))] [gbkey=CDS]
Sequence

ATGGCGCAGCCGGTGATTTTCTGCCGTGAAATATCTGCGTCGCCGGCGAACTGCACATCC
TATTCACCATTCCATCAAGTGGATGGTCAAAGTAGTGTACCCTTCGCAGCTTCTTGTTTA
AGGGTACCCAAAAATTGTTCACTAGTAGCTGCTAGATGCTCTTTGAAACCATCTATGATG
CCTTCAGCATTGGTCACTTCTAGCCCCCAACAAGTGTCCACAGATCCTGTTAATGTTGTT
TGTGACGGAAAAATTGGTGTTTTGTTGCTTAATCTTGGTGGCCCTGAATCTCTTGAAGAT
GTGCAGCCATTTTTATTCAATCTTTTTGCTGATCCTGATATTATTCGATTGCCAAGGCTG
TTTCGGTTTTTGCAAAGGCCGCTTGCGCAATTCATATCTGTTGCTAGAGCACCTAAGAGC
AAAGAAGGTTATGCTTCAATTGGTGGTGGCTCTCCTCTTCGACGGATAACTGATGCCCAG
GCTGAAGCCTTGAGAAAAGCACTGCGGGAAAGGAATGTGCCTGCAAAGGTGTATGTTGGT
ATGCGCTACTGGCATCCATTCACGGAGGAGGCCATTGAGCTGATTAAAAGGGATGGAATC
ACAAAGCTTGTTGTGCTCCCTCTTTATCCTCAGTTTTCAATATCTACTAGTGGTTCAAGC
CTTCGCCTTTTAGAGAGTATATTTCGGGAGGATGAGTATCTTGTTAACATGCAACACACA
GTAATACCCTCATGGTATCAACGGGAAGGATATATCAAAGCGATGGCAGATTTGATGGAA
AAAGAGCTGAAAAGTTTTGAACGTCCTGGGGAGGTGATGATATTCTTCAGTGCTCATGGG
GTACCACTTGCATATGTAGAGGAAGCAGGTGATCCATACAAGGCTGAAATGGAGGAATGT
GTGGACTTAATAATGGAAGAACTTGAGAAGAGAAGGGTATATAACGCATATACTTTGGCC
TATCAGAGTAGGGTTGGACCTGTTGAATGGCTGAAACCATATACTGATGAGACAATAATT
GAGCTTGGGAAGAAAGGGGTTAAGAGTATTCTTGCCGTGCCAATAAGTTTTGTAAGTGAG
CATATTGAGACATTAGAGGAAATTGATGTTGAATACAAGGAGCTAGCGTTGGAGTCTGGA
ATACAGAATTGGGCACGTGTTCCTGCCCTAGGTGTTGAACCCACTTTCATCTCAGATTTG
GCAGATGCAGTGATTGAAAGTCTTCCATATGTTGGAGCAATGGCAGTCTCAAATCTTGAA
GCTCGTCAGTCATTGGTTCCTCTTGGCAGCGTGGAAGAGCTATTGGCAGCATATGATTCA
CAGCGTAGGGAGCTACCACCTCCTGTAACAGTCTGGGAATGGGGTTGGACAAAAAGTGCA
GAAACGTGGAACGGAAGAGCAGCTATGTTGGCAGTTCTTGTGCTGCTGGTGCTAGAAGTA
ACAACTGGAGAAGGCTTCCTGCACCAGTGGGGTATATTGCCCTTATTCCGCTAG

Peptide Sequence

PEP ID

XP_016515796.1
PEP Infomation

PREDICTED: ferrochelatase-2, chloroplastic-like isoform X3 [Nicotiana tabacum]
Sequence

MAQPVIFCREISASPANCTSYSPFHQVDGQSSVPFAASCLRVPKNCSLVAARCSLKPSMM
PSALVTSSPQQVSTDPVNVVCDGKIGVLLLNLGGPESLEDVQPFLFNLFADPDIIRLPRL
FRFLQRPLAQFISVARAPKSKEGYASIGGGSPLRRITDAQAEALRKALRERNVPAKVYVG
MRYWHPFTEEAIELIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHT
VIPSWYQREGYIKAMADLMEKELKSFERPGEVMIFFSAHGVPLAYVEEAGDPYKAEMEEC
VDLIMEELEKRRVYNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSILAVPISFVSE
HIETLEEIDVEYKELALESGIQNWARVPALGVEPTFISDLADAVIESLPYVGAMAVSNLE
ARQSLVPLGSVEELLAAYDSQRRELPPPVTVWEWGWTKSAETWNGRAAMLAVLVLLVLEV
TTGEGFLHQWGILPLFR

Transcript Sequence

Gene sequence data has not been registered.